Information for 9-CTAGAAGAGA (Motif 12)


Reverse Opposite:

p-value:1e-7
log p-value:-1.773e+01
Information Content per bp:1.865
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets40.2 +/- 19.1bp
Average Position of motif in Background39.0 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

XBP1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTAGAAGAGA
CTCGAAG---

ABF2/MA0266.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTAGAAGAGA
CTCTAGA-----

SFL1/MA0377.1/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CTAGAAGAGA-----
TAGAGAATAGAAGAAATAAAA

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTAGAAGAGA
--NGAAGC--

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTAGAAGAGA-
---RGAGAGAG

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTAGAAGAGA--
TACTGGAAAAAAAA

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGAAGAGA--
NNGATCTAGAACCTNNN

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTAGAAGAGA---
-CGGAAGTGAAAC

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTAGAAGAGA-------
NNCCTGNAAAAAAAAAAAAA

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTAGAAGAGA-
NGNTCTAGAACCNGV