Information for 5-GGGCGCGGTGGT (Motif 13)


Reverse Opposite:

p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.714
Number of Target Sequences with motif141.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif69.2
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets37.7 +/- 18.0bp
Average Position of motif in Background38.3 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGCGGTGGT
NNAGGGGCGGGGTNNA

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GGGCGCGGTGGT
-GGCGCGCT---

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGCGGTGGT
NANAAGGGCGTGGTC--

Run/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GGGCGCGGTGGT
---GGCGGTG--

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGGCGCGGTGGT
NGGGGCGGTG--

SP3/MA0746.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGCGGTGGT
GGGGGCGTGGN---

SUT1?/SacCer-Promoters/Homer

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGGCGCGGTGGT
--GCGCGGGG--

SP8/MA0747.1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGCGGTGGT
AGTGGGCGTGGC---

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGCGCGGTGGT
TGGGTGGGGC---

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGGCGCGGTGGT---
---NTCGGTGGTCGC