Information for 12-GGATCGCCTG (Motif 15)


Reverse Opposite:

p-value:1e-6
log p-value:-1.585e+01
Information Content per bp:1.821
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets35.4 +/- 20.8bp
Average Position of motif in Background4.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GGATCGCCTG----
--ATCACCTGAGGC

RAV1(var.2)/MA0583.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GGATCGCCTG----
--ATCACCTGAGGC

sna/MA0086.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GGATCGCCTG
----CACCTG

SOK2(MacIsaac)/Yeast

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGATCGCCTG-
---TTGCCTGC

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGATCGCCTG--
--NNCACCTGNN

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGATCGCCTG
-CCTCACCTG

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGATCGCCTG-----
GGNGCGNCTGTTNNN

REI1/MA0364.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGATCGCCTG-
----CCCCTGA

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGATCGCCTG---
GGGGCTYGKCTGGGA

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGATCGCCTG--
--ACCACCTGTT