Information for 14-TGTGAGGTTA (Motif 17)


Reverse Opposite:

p-value:1e-5
log p-value:-1.296e+01
Information Content per bp:1.819
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets36.9 +/- 18.2bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB1/MA0018.2/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TGTGAGGTTA
--TGACGTCA

TGA7/MA1070.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGTGAGGTTA
GGTGACGTCA

CRE(bZIP)/Promoter/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTGAGGTTA---
-GTGACGTCACCG

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTGAGGTTA
TTTGCGGTTT

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGTGAGGTTA---
-RTGACGTCAYCN

CST6/MA0286.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGTGAGGTTA
-ATGACGTAA

MYB59/MA1042.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGTGAGGTTA
-GTTAGGTA-

TGA1(bZIP)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGTGAGGTTA
TTGATGACGTTA

BZIP60/MA0967.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGTGAGGTTA
--TGACGTCA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGTGAGGTTA
--TGACGT--