Information for 16-GGGTGTGTGT (Motif 19)


Reverse Opposite:

p-value:1e-4
log p-value:-1.032e+01
Information Content per bp:1.704
Number of Target Sequences with motif115.0
Percentage of Target Sequences with motif4.80%
Number of Background Sequences with motif66.9
Percentage of Background Sequences with motif2.66%
Average Position of motif in Targets38.3 +/- 18.0bp
Average Position of motif in Background33.8 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGTGTGT
TGTGTGTGTG-

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GGGTGTGTGT----
NNGCGTGTGTGCNGCN

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GGGTGTGTGT--
GGGGGTGTGTCC

daf-12/MA0538.1/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GGGTGTGTGT---
GTGTGTGTGTGCGTG

AFT2/MA0270.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGTGTGT
GGGGTGTG---

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GGGTGTGTGT
--KTGTTTGC

MET31(MacIsaac)/Yeast

Match Rank:7
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGGTGTGTGT-
---GGTGTGGC

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGGTGTGTGT----
NNNNTTGTGTGCTTNN

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGTGTGTGT
NTGGGTGTGGCC

RAP1(MacIsaac)/Yeast

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGTGTGTGT--
GTGTATGGGTGT