Information for 17-TTACTTGAAC (Motif 20)


Reverse Opposite:

p-value:1e-4
log p-value:-1.020e+01
Information Content per bp:1.657
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets37.7 +/- 20.7bp
Average Position of motif in Background27.7 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTACTTGAAC
NCACTTGAAA

vnd/MA0253.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TTACTTGAAC
-CACTTGAAA

NTL9/MA1046.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTACTTGAAC
ATTACTTAA--

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TTACTTGAAC--
--GCTTGAACAA

ct/MA0218.1/Jaspar

Match Rank:5
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TTACTTGAAC
----TTGAAC

vnd/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTACTTGAAC
-CACTTGAN-

ARR1(MacIsaac)/Yeast

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTACTTGAAC
--ACTTGAAT

tin/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTACTTGAAC
-CACTTGA--

HHEX/MA0183.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTACTTGAAC
-TAATTAAA-

CIN5/MA0284.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTACTTGAAC
GATTACGTAA--