Information for 4-AGCATTTT (Motif 8)


Reverse Opposite:

p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.788
Number of Target Sequences with motif233.0
Percentage of Target Sequences with motif9.72%
Number of Background Sequences with motif133.1
Percentage of Background Sequences with motif5.28%
Average Position of motif in Targets36.6 +/- 20.4bp
Average Position of motif in Background38.6 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CST6(MacIsaac)/Yeast

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AGCATTTT
TGCATTTN

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----AGCATTTT--
AAGTCAGCANTTTTN

SUM1/MA0398.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGCATTTT-
AAAATTTTT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------AGCATTTT-
HWWGTCAGCAWWTTT

YAP5(MacIsaac)/Yeast

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGCATTTT
AAGCAT---

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AGCATTTT
NGTCAGCANTTT

YAP5/MA0417.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGCATTTT
AAGCAT---

Unknown4/Drosophila-Promoters/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGCATTTT-
TKYGGTATTTTT

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------AGCATTTT
CTGAGTCAGCAATTT

sd/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCATTTT-
AANATGTNT