Information for 1-NMMTCCCAGC (Motif 1)


Reverse Opposite:

p-value:1e-32
log p-value:-7.400e+01
Information Content per bp:1.604
Number of Target Sequences with motif441.0
Percentage of Target Sequences with motif28.31%
Number of Background Sequences with motif174.1
Percentage of Background Sequences with motif11.39%
Average Position of motif in Targets34.9 +/- 20.1bp
Average Position of motif in Background36.9 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ACE2/MA0267.1/Jaspar

Match Rank:1
Score:0.86
Offset:4
Orientation:forward strand
Alignment:NMMTCCCAGC-
----ACCAGCA

SWI5/MA0402.1/Jaspar

Match Rank:2
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:NMMTCCCAGC-
---AACCAGCA

SWI5(MacIsaac)/Yeast

Match Rank:3
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:NMMTCCCAGC-
---AACCAGCA

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:NMMTCCCAGC--
--TGCCCAGNHW

SWI5/Literature(Harbison)/Yeast

Match Rank:5
Score:0.77
Offset:5
Orientation:reverse strand
Alignment:NMMTCCCAGC-
-----CCAGCA

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:6
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:NMMTCCCAGC-
----ACCAGCA

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:NMMTCCCAGC
----CACAGN

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:NMMTCCCAGC-----
ATTTCCCAGVAKSCY

YPR022C/MA0436.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:NMMTCCCAGC
---CCCCACG

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:NMMTCCCAGC------
-CCACACAGCAGGAGA