Information for 9-TCTKTACTAA (Motif 10)


Reverse Opposite:

p-value:1e-13
log p-value:-3.189e+01
Information Content per bp:1.736
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif4.69%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets36.7 +/- 20.6bp
Average Position of motif in Background31.6 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ARR1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TCTKTACTAA
---TTACTAA

YAP3/Literature(Harbison)/Yeast

Match Rank:2
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TCTKTACTAA
---TTACTAA

YAP5/Literature(Harbison)/Yeast

Match Rank:3
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TCTKTACTAA
---TTACTAA

YAP6/Literature(Harbison)/Yeast

Match Rank:4
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TCTKTACTAA
---TTACTAA

YAP3(MacIsaac)/Yeast

Match Rank:5
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TCTKTACTAA
---TTACTAA

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TCTKTACTAA---
TTATGTACTAATAA

PB0129.1_Glis2_2/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCTKTACTAA----
TCTTTANTAATANN

br-Z2/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TCTKTACTAA
----TAGTAA

br(var.4)/MA0013.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCTKTACTAA
TTTGTTTACTA-

YAP7/MA0419.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCTKTACTAA-
TGCTTACTAAT