Information for 10-TGASTMGA (Motif 11)


Reverse Opposite:

p-value:1e-13
log p-value:-3.156e+01
Information Content per bp:1.866
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif4.30%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets41.2 +/- 20.4bp
Average Position of motif in Background34.4 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ASH1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGASTMGA
CTGACT---

BAS1/BAS1_SM/2-BAS1(Harbison)/Yeast

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGASTMGA
TGACTC--

BAS1(MacIsaac)/Yeast

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGASTMGA--
TGACTCTTNC

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGASTMGA
TGACTCA-

ARG81(MacIsaac)/Yeast

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGASTMGA
GTGACTCN-

ARG81/MA0272.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGASTMGA
GTGACTCT-

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGASTMGA--
TGTCTAGACG

GCN4(MacIsaac)/Yeast

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGASTMGA
ATGACTCA-

RTG3(MacIsaac)/Yeast

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGASTMGA
ATGACTCA-

OPI1/Literature(Harbison)/Yeast

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGASTMGA
-GATTCGA