Information for 6-CTCWGKAGTTTG (Motif 13)


Reverse Opposite:

p-value:1e-12
log p-value:-2.984e+01
Information Content per bp:1.716
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif5.39%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets32.6 +/- 19.5bp
Average Position of motif in Background24.1 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

dl/dmmpmm(Down)/fly

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTCWGKAGTTTG-
---TGGATTTTCC

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTCWGKAGTTTG-------
---TGGACTTTGNNCTNTG

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTCWGKAGTTTG------
---TGGACTTTGNNCTCN

pan/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:CTCWGKAGTTTG---
--------TTTGATN

pan/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CTCWGKAGTTTG--
-------CTTTGAT

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCWGKAGTTTG-----
-ATTGGACTTTGACCCC

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCWGKAGTTTG
NGTCAGCANTTT-

pan/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:CTCWGKAGTTTG--
--------TTTGAT

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTCWGKAGTTTG
CTGAGTCAGCAATTT-

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCWGKAGTTTG-
AAGTCAGCANTTTTN