Information for 11-RGGCAACATG (Motif 14)


Reverse Opposite:

p-value:1e-12
log p-value:-2.976e+01
Information Content per bp:1.688
Number of Target Sequences with motif129.0
Percentage of Target Sequences with motif8.28%
Number of Background Sequences with motif37.8
Percentage of Background Sequences with motif2.47%
Average Position of motif in Targets37.5 +/- 18.5bp
Average Position of motif in Background46.4 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RAV1(1)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:RGGCAACATG--
CAGCAACAGAAA

RAV1/MA0582.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:RGGCAACATG--
CAGCAACAGAAA

mab-3/MA0262.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---RGGCAACATG
ANTTCGCAACATT

MA0262.1_mab-3/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---RGGCAACATG
ANTTCGCAACATT

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---RGGCAACATG
TNNGGGCAG----

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:RGGCAACATG--
AGGAAACAGCTG

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:RGGCAACATG---
ATGCAACAGGTGG

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:RGGCAACATG
-GTAAACAG-

YAP5(MacIsaac)/Yeast

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:RGGCAACATG
---AAGCAT-

YAP5/MA0417.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:RGGCAACATG
---AAGCAT-