Information for 11-ACATCAAG (Motif 15)


Reverse Opposite:

p-value:1e-12
log p-value:-2.907e+01
Information Content per bp:1.685
Number of Target Sequences with motif219.0
Percentage of Target Sequences with motif14.06%
Number of Background Sequences with motif95.1
Percentage of Background Sequences with motif6.22%
Average Position of motif in Targets37.9 +/- 20.0bp
Average Position of motif in Background33.5 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACATCAAG-----
TCACCCATCAATAAACA

Aef1/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACATCAAG
-CAACAA-

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACATCAAG----
ACATCAAAGGNA

cad/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACATCAAG
-CATAAA-

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACATCAAG--
ACWTCAAAGG

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACATCAAG------
NNNAGATCAAAGGANNN

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACATCAAG
ACGTCA--

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACATCAAG----
AAAGATCAAAGGAA

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACATCAAG------
TATAGATCAAAGGAAAA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACATCAAG--
ACATCAAAGG