Information for 13-CARGTAGA (Motif 17)


Reverse Opposite:

p-value:1e-11
log p-value:-2.712e+01
Information Content per bp:1.808
Number of Target Sequences with motif205.0
Percentage of Target Sequences with motif13.16%
Number of Background Sequences with motif89.8
Percentage of Background Sequences with motif5.88%
Average Position of motif in Targets36.1 +/- 19.3bp
Average Position of motif in Background36.6 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tag/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:CARGTAGA
CAGGTAG-

Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CARGTAGA-
WCAGGTAGVM

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----CARGTAGA----
NNNTTAGGTAGCNTNT

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CARGTAGA----
NNTGTAGGTAGCANNT

sna/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CARGTAGA
GCAGGTGG-

sna/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CARGTAGA
ANCAGGTGG-

sna/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CARGTAGA
AAGCAAGTGG-

MOT3/MA0340.1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CARGTAGA
AAGGCA--

MOT3/Literature(Harbison)/Yeast

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CARGTAGA
NAGGCA--

MOT3(MacIsaac)/Yeast

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CARGTAGA
NAGGCA--