Information for 14-CATGCATG (Motif 18)


Reverse Opposite:

p-value:1e-11
log p-value:-2.569e+01
Information Content per bp:1.680
Number of Target Sequences with motif185.0
Percentage of Target Sequences with motif11.87%
Number of Background Sequences with motif78.8
Percentage of Background Sequences with motif5.16%
Average Position of motif in Targets37.2 +/- 18.9bp
Average Position of motif in Background36.9 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CATGCATG
TGCATGCA--

LEC2/MA0581.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CATGCATG-
TGCATGCACAT

SOK2/MA0385.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CATGCATG--
ACCTGCAGGCA

ABI3/MA0564.1/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CATGCATG
CTGCATGCA--

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CATGCATG
TCCATGCAAA

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CATGCATG-
NNTNTCATGAATGT

PL0008.1_hlh-29/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CATGCATG-----
CTGCCACGCGTGGCCAA

unc-86/MA0926.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CATGCATG-
-ATGCATAT

YAP5(MacIsaac)/Yeast

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CATGCATG
-AAGCAT-

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CATGCATG--
SCAGYCADGCATGAC