Information for 2-YGKGWGGS (Motif 2)


Reverse Opposite:

p-value:1e-22
log p-value:-5.088e+01
Information Content per bp:1.749
Number of Target Sequences with motif219.0
Percentage of Target Sequences with motif14.06%
Number of Background Sequences with motif64.0
Percentage of Background Sequences with motif4.18%
Average Position of motif in Targets35.9 +/- 21.3bp
Average Position of motif in Background30.4 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----YGKGWGGS-----
GTATTGGGTGGGTAATT

KLF5/MA0599.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:YGKGWGGS--
GGGGNGGGGC

MET31(MacIsaac)/Yeast

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:YGKGWGGS
GGTGTGGC

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----YGKGWGGS
NGCGTGGGCGGR

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:YGKGWGGS--
TGGGTGGGGC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:YGKGWGGS--
TGCGTGGGYG

ZNF740/MA0753.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-YGKGWGGS-
GTGGGGGGGG

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:YGKGWGGS--
DGGGYGKGGC

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:YGKGWGGS
-GGGTGC-

ARF1(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:YGKGWGGS---
TGGGAGACAAG