Information for 16-VYVAAACTCM (Motif 21)


Reverse Opposite:

p-value:1e-9
log p-value:-2.283e+01
Information Content per bp:1.628
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets35.0 +/- 16.4bp
Average Position of motif in Background33.2 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SUT2/MA0400.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--VYVAAACTCM--------
ATGATAAACTCCGAAAATTT

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-VYVAAACTCM------
TACGAGACTCCTCTAAC

YLR278C/MA0430.1/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:VYVAAACTCM--
----AACTCCGG

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:VYVAAACTCM-
--AAAAGTCAA

tll/MA0459.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:VYVAAACTCM--
--AAAAGTCAAA

ADR1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:VYVAAACTCM-
-----ACCCCN

ADR1(MacIsaac)/Yeast

Match Rank:7
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:VYVAAACTCM-
-----ACCCCN

tll/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-VYVAAACTCM----
ACNAAAAGTCAAANN

ARG80(MacIsaac)/Yeast

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:VYVAAACTCM
---AGACGC-

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-VYVAAACTCM-----
GGCAAAAGTCCAATAA