Information for 21-AGCAAAGGAA (Motif 23)


Reverse Opposite:

p-value:1e-6
log p-value:-1.580e+01
Information Content per bp:1.847
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets35.5 +/- 17.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

UME1/UME1_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGCAAAGGAA
AAGGAAANGTA

RME1(MacIsaac)/Yeast

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGCAAAGGAA
TCCAAAGGAA

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAAGGAA--
TATAGATCAAAGGAAAA

AZF1/MA0277.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AGCAAAGGAA-
--AAAAAGAAA

MAC1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGCAAAGGAA
GAGCAAA----

RME1/MA0370.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGCAAAGGAA
TCCAAAGGAA

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAAAGGAA--
NNNAGATCAAAGGANNN

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAAGGAA--
TATAGATCAAAGGAAAA

MAC1/MA0326.1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAAGGAA
TGAGCAAA----

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAAAGGAA--
NANAGATCAAAGGGNNN