Information for 18-AGTAAAYG (Motif 24)


Reverse Opposite:

p-value:1e-6
log p-value:-1.565e+01
Information Content per bp:1.737
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif3.27%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets33.8 +/- 19.6bp
Average Position of motif in Background25.1 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGTAAAYG--
GCTAAACGGT

zen/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGTAAAYG
AATAAA--

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGTAAAYG-
HAATAAAGNN

ovo/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGTAAAYG-
AGTAACNGT

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGTAAAYG
AAAGTAAACA

ARR1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGTAAAYG
TTAGTAA---

YAP3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGTAAAYG
TTAGTAA---

YAP5/Literature(Harbison)/Yeast

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGTAAAYG
TTAGTAA---

YAP6/Literature(Harbison)/Yeast

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGTAAAYG
TTAGTAA---

YAP3(MacIsaac)/Yeast

Match Rank:10
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGTAAAYG
TTAGTAA---