Information for 19-ATGACACG (Motif 26)


Reverse Opposite:

p-value:1e-6
log p-value:-1.414e+01
Information Content per bp:1.807
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets36.8 +/- 18.9bp
Average Position of motif in Background31.2 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ems/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--ATGACACG
TAATGACA--

Vis/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--ATGACACG
ANNTGACAGN

MATALPHA2/MA0328.2/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:ATGACACG
ATTACACG

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.79
Offset:0
Orientation:forward strand
Alignment:ATGACACG
TTGACAG-

vis/MA0252.1/Jaspar

Match Rank:5
Score:0.79
Offset:1
Orientation:forward strand
Alignment:ATGACACG
-TGACAG-

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.79
Offset:0
Orientation:forward strand
Alignment:ATGACACG
TTGACAGG

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-ATGACACG
CATGAC---

HMRA2/MA0318.1/Jaspar

Match Rank:8
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:ATGACACG
ATTACATG

unc-62/MA0918.1/Jaspar

Match Rank:9
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ATGACACG--
NNNTGACAGCTN

Hth/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ATGACACG
CTNTGACAGN