Information for 2-AWWAAAAATAWA (Motif 3)


Reverse Opposite:

p-value:1e-21
log p-value:-4.982e+01
Information Content per bp:1.584
Number of Target Sequences with motif424.0
Percentage of Target Sequences with motif27.21%
Number of Background Sequences with motif203.8
Percentage of Background Sequences with motif13.33%
Average Position of motif in Targets37.8 +/- 19.3bp
Average Position of motif in Background33.5 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

zen/dmmpmm(Down)/fly

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:AWWAAAAATAWA
-ATAAAAATAAA

SUM1/MA0398.1/Jaspar

Match Rank:2
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:AWWAAAAATAWA
---AAAAATTTT

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AWWAAAAATAWA
-CTAAAAATAA-

FOXC2/MA0846.1/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AWWAAAAATAWA
TAAGTAAACAAA

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AWWAAAAATAWA-
-AAACAAACATTC

NHP6B/MA0346.1/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AWWAAAAATAWA------
NNNTATTATATATANNNANA

br-Z1/dmmpmm(Down)/fly

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AWWAAAAATAWA
-ATAATAATA--

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AWWAAAAATAWA
TATGTAAATAT-

Antp/dmmpmm(Down)/fly

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AWWAAAAATAWA
ATAAATAATAAT

Antp/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.72
Offset:6
Orientation:forward strand
Alignment:AWWAAAAATAWA
------AATAAT