Information for 4-TSCCCAGGCTGG (Motif 5)


Reverse Opposite:

p-value:1e-18
log p-value:-4.337e+01
Information Content per bp:1.485
Number of Target Sequences with motif513.0
Percentage of Target Sequences with motif32.93%
Number of Background Sequences with motif287.1
Percentage of Background Sequences with motif18.78%
Average Position of motif in Targets36.3 +/- 18.6bp
Average Position of motif in Background36.1 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TSCCCAGGCTGG
TGCCCAGNHW--

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TSCCCAGGCTGG-
ATGCCCGGGCATGT

SWI5/Literature(Harbison)/Yeast

Match Rank:3
Score:0.64
Offset:6
Orientation:forward strand
Alignment:TSCCCAGGCTGG
------GGCTGA

ACE2/MA0267.1/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TSCCCAGGCTGG-
------TGCTGGT

SWI5/MA0402.1/Jaspar

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TSCCCAGGCTGG--
------TGCTGGTT

SWI5(MacIsaac)/Yeast

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TSCCCAGGCTGG--
------TGCTGGTT

Tag/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TSCCCAGGCTGG
----CAGGTAG-

PUT3/MA0358.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TSCCCAGGCTGG
--CCCGGGAA--

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TSCCCAGGCTGG-
------TGCTGGT

YML081W(MacIsaac)/Yeast

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TSCCCAGGCTGG-
---CCAGTCTGAA