Information for 8-AGTGATTCTC (Motif 9)


Reverse Opposite:

p-value:1e-14
log p-value:-3.352e+01
Information Content per bp:1.662
Number of Target Sequences with motif120.0
Percentage of Target Sequences with motif7.70%
Number of Background Sequences with motif28.9
Percentage of Background Sequences with motif1.89%
Average Position of motif in Targets36.8 +/- 16.8bp
Average Position of motif in Background37.5 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rel/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGTGATTCTC-
NGGGATTCCCC

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGTGATTCTC
CNGTGATTTN-

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTGATTCTC------
-NNAATTCTCGNTNAN

PH0017.1_Cux1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGTGATTCTC----
TAGTGATCATCATTA

dif/Rel/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGTGATTCTC-
GGGGATTCCCC

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGTGATTCTC------
-AGTATTCTCGGTTGC

ARG81(MacIsaac)/Yeast

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTGATTCTC
-GTGACTCN-

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGTGATTCTC
GCAGTGATTT--

ARG81/MA0272.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTGATTCTC
-GTGACTCT-

ARR1/MA0945.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGTGATTCTC-
-NAGATTCGNT