Information for 1-MACCCASC (Motif 1)


Reverse Opposite:

p-value:1e-40
log p-value:-9.266e+01
Information Content per bp:1.752
Number of Target Sequences with motif647.0
Percentage of Target Sequences with motif26.92%
Number of Background Sequences with motif299.9
Percentage of Background Sequences with motif12.00%
Average Position of motif in Targets34.7 +/- 20.7bp
Average Position of motif in Background37.4 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YPR022C/MA0436.1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:MACCCASC
-CCCCACG

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--MACCCASC--
YCCGCCCACGCN

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:MACCCASC--
CRCCCACGCA

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:MACCCASC--
TGCCCAGNHW

SWI5/MA0402.1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:MACCCASC-
-AACCAGCA

ACE2/MA0267.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:MACCCASC-
--ACCAGCA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--MACCCASC
HTTTCCCASG

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----MACCCASC
GGACCACCCACG

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-MACCCASC
GCACCC---

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--MACCCASC-----
ATTTCCCAGVAKSCY