Information for 7-TTACAGGC (Motif 10)


Reverse Opposite:

p-value:1e-14
log p-value:-3.344e+01
Information Content per bp:1.897
Number of Target Sequences with motif137.0
Percentage of Target Sequences with motif5.70%
Number of Background Sequences with motif40.3
Percentage of Background Sequences with motif1.61%
Average Position of motif in Targets35.4 +/- 19.0bp
Average Position of motif in Background29.6 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HMRA2/MA0318.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTACAGGC
ATTACATG-

MATALPHA2/MA0328.2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTACAGGC
ATTACACG-

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTACAGGC
-CACAGN-

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTACAGGC
TTGACAGC-

SOK2(MacIsaac)/Yeast

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTACAGGC--
--GCAGGCAA

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTACAGGC----
NNATTGACAGGTGCTT

achi/MA0207.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTACAGGC
TGACAG--

INO4/MA0322.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTACAGGC
TTCACATGC

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTACAGGC-
-TGCAGGNA

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTACAGGC
TGAGTGACAGSC