Information for 9-ATCGCTTG (Motif 11)


Reverse Opposite:

p-value:1e-13
log p-value:-3.188e+01
Information Content per bp:1.477
Number of Target Sequences with motif286.0
Percentage of Target Sequences with motif11.90%
Number of Background Sequences with motif144.4
Percentage of Background Sequences with motif5.78%
Average Position of motif in Targets37.6 +/- 18.1bp
Average Position of motif in Background36.7 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

tin/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ATCGCTTG-
--CACTTGA

NAC92/MA1044.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATCGCTTG---
NNTGGCGTGTNN

vnd/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ATCGCTTG--
--CACTTGAN

tin/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATCGCTTG--
--CACTTGAG

RIM101/MA0368.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:ATCGCTTG---
----CTTGGCG

tin/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATCGCTTG-
--CACTTAA

NAC058/MA0938.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATCGCTTG-
-TTGCGTGN

srp/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCGCTTG--
CTATCGGTAGAT

BHLH112/MA0961.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATCGCTTG-
GCCACTTGC

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCGCTTG--
ACCACTTGAA