Information for 12-CATGCATGAG (Motif 13)


Reverse Opposite:

p-value:1e-12
log p-value:-2.834e+01
Information Content per bp:1.660
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets35.9 +/- 19.5bp
Average Position of motif in Background35.6 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SOK2/MA0385.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CATGCATGAG
ACCTGCAGGCA

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CATGCATGAG
TGCATGCA----

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CATGCATGAG
TCCATGCAAA--

LEC2/MA0581.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATGCATGAG
TGCATGCACAT-

PHD1/MA0355.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CATGCATGAG
ACCTGCAGCA-

INO2/INO2_YPD/1-INO4,2-INO2(Harbison)/Yeast

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CATGCATGAG
---GCATGTG

ABI3/MA0564.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CATGCATGAG
CTGCATGCA----

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CATGCATGAG---
NTTNTATGAATGTGNNC

unc-86/MA0926.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CATGCATGAG
-ATGCATAT-

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CATGCATGAG---
ACATTCATGACACG