Information for 13-ACTTSAAG (Motif 14)


Reverse Opposite:

p-value:1e-11
log p-value:-2.691e+01
Information Content per bp:1.783
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif4.70%
Number of Background Sequences with motif35.0
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets39.0 +/- 20.7bp
Average Position of motif in Background35.6 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ACTTSAAG
CCACTTGAA-

ceh-22/MA0264.1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACTTSAAG
ACCACTTGAAA

MA0264.1_ceh-22/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACTTSAAG
ACCACTTGAAA

tin/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ACTTSAAG
CCACTTGAGN

tin/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACTTSAAG
CACTTGA--

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACTTSAAG
NCACTTGAAA

vnd/MA0253.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACTTSAAG
CACTTGAAA

vnd/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACTTSAAG
CACTTGAN-

XBP1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACTTSAAG
-CTTCGAG

tin/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACTTSAAG
CACTTAA--