Information for 16-CTAAGTAATT (Motif 16)


Reverse Opposite:

p-value:1e-10
log p-value:-2.514e+01
Information Content per bp:1.751
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets37.5 +/- 20.9bp
Average Position of motif in Background38.9 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0008.1_Barx2/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CTAAGTAATT-------
-TAAGTAATTAGTTATA

NTL9/MA1046.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CTAAGTAATT
TTAAGTAAT-

PH0007.1_Barx1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTAAGTAATT-------
-AAAGTAATTAGTGAAT

sd/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTAAGTAATT--
AAATGAAATTTG

PH0071.1_Hoxc6/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTAAGTAATT-------
CAAATTAATTAATAAAA

sd/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTAAGTAATT---
AAATGAAATTCGA

PH0028.1_En1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTAAGTAATT-----
GCGAACTAATTAATGC

MEOX2/MA0706.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTAAGTAATT---
---AGTAATTAAC

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTAAGTAATT
---AATAATT

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTAAGTAATT----
NATTTAAGTACTTANNA