Information for 23-CTTTGTTCTC (Motif 22)


Reverse Opposite:

p-value:1e-6
log p-value:-1.608e+01
Information Content per bp:1.555
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets38.2 +/- 19.9bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTCTC
YCTTTGTTCC-

kni/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:CTTTGTTCTC
-TTTGTTCCC

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTTCTC--
TNNTCCTTTGTTCTNNT

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTTCTC--
NNNTCCTTTGTTCTNNN

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTCTC
CCTTTGTTTT-

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTCTC
CCATTGTTTT-

MAC1/Literature(Harbison)/Yeast

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTTTGTTCTC
-TTTGCTC--

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGTTCTC-
AACCCTTTGATCTTT

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGTTCTC
TNCCTTTGATGT-

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGTTCTC--
AATCCCTTTGATCTATC