Information for 4-YAAGATGR (Motif 3)


Reverse Opposite:

p-value:1e-27
log p-value:-6.381e+01
Information Content per bp:1.797
Number of Target Sequences with motif383.0
Percentage of Target Sequences with motif15.94%
Number of Background Sequences with motif155.6
Percentage of Background Sequences with motif6.22%
Average Position of motif in Targets35.2 +/- 19.9bp
Average Position of motif in Background36.3 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:YAAGATGR----
CAAGATGGCGGC

Tal1

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:YAAGATGR
-CAGATG-

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:YAAGATGR----
CAAGATGGCGGC

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----YAAGATGR-----
AAGGCCAGATGGTCCGG

GAT3(MacIsaac)/Yeast

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-YAAGATGR
ATAACATG-

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-YAAGATGR-
AACAGATGGC

ARR2/MA0949.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YAAGATGR--
NAAGATTCGN

ZBTB18/MA0698.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---YAAGATGR--
CATCCAGATGTTC

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-YAAGATGR-
TCCAGATGTT

PL0012.1_hlh-2::hlh-8/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----YAAGATGR----
NANACCAGATGTTTNN