Information for 5-GTGATYCTCC (Motif 5)


Reverse Opposite:

p-value:1e-19
log p-value:-4.403e+01
Information Content per bp:1.591
Number of Target Sequences with motif203.0
Percentage of Target Sequences with motif8.45%
Number of Background Sequences with motif66.1
Percentage of Background Sequences with motif2.65%
Average Position of motif in Targets35.8 +/- 17.0bp
Average Position of motif in Background34.3 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rel/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTGATYCTCC
NGGGATTCCCC

dif/Rel/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTGATYCTCC
GGGGATTCCCC

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGATYCTCC
ATAATCCC--

PH0162.1_Six2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTGATYCTCC---
ANANGTGATACCCCATT

GATA15/MA1016.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTGATYCTCC
TATGATCAG--

FOSL2/MA0478.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTGATYCTCC-
NTGAGTCATCN

NFKB1/MA0105.4/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTGATYCTCC-
AGGGGATTCCCCT

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTGATYCTCC---
ANANNTGATACCCNATN

PB0142.1_Jundm2_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTGATYCTCC---
NNGGTGACTCATCANN

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGATYCTCC-
GGGGATTCCCCC