Information for 9-GGSTGCWGTG (Motif 8)


Reverse Opposite:

p-value:1e-15
log p-value:-3.552e+01
Information Content per bp:1.765
Number of Target Sequences with motif155.0
Percentage of Target Sequences with motif6.45%
Number of Background Sequences with motif48.3
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets36.0 +/- 19.6bp
Average Position of motif in Background34.6 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GGSTGCWGTG-----
NNNANTGCAGTGCNNTT

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGSTGCWGTG
GGGTGCANT-

Run/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGSTGCWGTG
---GGCGGTG

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGSTGCWGTG
GGGTGC----

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGSTGCWGTG---
NNTCCTGCTGTGNNN

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGSTGCWGTG---
TNTCCTGCTGTGNNG

AFT2(MacIsaac)/Yeast

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGSTGCWGTG
GGGTGCA---

RCS1(MacIsaac)/Yeast

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGSTGCWGTG
GGGTGCA---

MET28/MA0332.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGSTGCWGTG-
-----CTGTGG

MET28(MacIsaac)/Yeast

Match Rank:10
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGSTGCWGTG-
-----CTGTGG