Information for 9-GTGGCTCATGCC (Motif 9)


Reverse Opposite:

p-value:1e-15
log p-value:-3.534e+01
Information Content per bp:1.775
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif3.66%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets35.1 +/- 16.5bp
Average Position of motif in Background33.3 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HES7/MA0822.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTGGCTCATGCC-
-TGGCACGTGCCA

HLHm5/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGGCTCATGCC
-TGNCNCGTGC-

E(spl)/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGGCTCATGCC
TGTGCCACGTGC-

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGGCTCATGCC-
-TGGCACGTGCCG

h/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGGCTCATGCC
-TGGCGCGTGNC

FUS3/MA0565.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GTGGCTCATGCC
---GCGCATGCG

BHLH104/MA0960.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTGGCTCATGCC
--GGCACGTGCC

hkb/MA0450.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GTGGCTCATGCC--
-----TCACGCCCC

h/MA0449.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTGGCTCATGCC
--GGCACGTGCC

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GTGGCTCATGCC
----TGCATGCA