Information for 1-GTAATCCCAKCT (Motif 1)


Reverse Opposite:

p-value:1e-13
log p-value:-3.077e+01
Information Content per bp:1.667
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif6.02%
Number of Background Sequences with motif22.9
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets34.3 +/- 19.4bp
Average Position of motif in Background39.0 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gsc/dmmpmm(Noyes)/fly

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTAATCCCAKCT
-TAATCC-----

Gsc/MA0190.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTAATCCCAKCT
-TAATCC-----

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTAATCCCAKCT
YTAATCCY----

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCCAKCT
CTTAATCCC----

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTAATCCCAKCT
TTAATCCC----

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTAATCCCAKCT
-AAATCACAGCA

oc/MA0234.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTAATCCCAKCT
-TAATCC-----

bcd/MA0212.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTAATCCCAKCT
-TAATCC-----

Ptx1/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTAATCCCAKCT
NGTTAATCCC----

bcd/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCCAKCT
CCTAATCCC----