Information for 5-GTTTGTTS (Motif 11)


Reverse Opposite:

p-value:1e-7
log p-value:-1.802e+01
Information Content per bp:1.697
Number of Target Sequences with motif122.0
Percentage of Target Sequences with motif7.50%
Number of Background Sequences with motif54.8
Percentage of Background Sequences with motif3.23%
Average Position of motif in Targets33.9 +/- 18.5bp
Average Position of motif in Background36.3 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTTTGTTS
GTTTGTT-

kni/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTTTGTTS--
-TTTGTTCCC

Aef1/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GTTTGTTS
--TTGTTG

GAMYB(MYB)/Hordeum vulgare/AthaMap

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTTTGTTS
GGCGGTTG

Gam1/MA0034.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTTTGTTS--
GGCGGTTGTC

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GTTTGTTS
GAATGTTTGTTT

slbo/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGTTS
CTGTTTATTG

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTTTGTTS
-ATTGTT-

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GTTTGTTS----
TNNTCCTTTGTTCTNNT

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GTTTGTTS
TATTGTTTATT-