Information for 9-AATGATCCAC (Motif 13)


Reverse Opposite:

p-value:1e-7
log p-value:-1.679e+01
Information Content per bp:1.699
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets39.5 +/- 19.6bp
Average Position of motif in Background25.9 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:AATGATCCAC
----ATCCAC

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AATGATCCAC
-ATAATCCC-

FOS/MA0476.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AATGATCCAC-
NATGAGTCANN

YPR013C/MA0434.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AATGATCCAC-
--NGATCTACA

JUND/MA0491.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AATGATCCAC-
NATGAGTCACN

HNF1B/MA0153.2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AATGATCCAC
GTTAATNATTAAC

HNF1A/MA0046.2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AATGATCCAC-
AGTTAATGATTAACT

BATF::JUN/MA0462.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATGATCCAC
GAAATGACTCA-

ap/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AATGATCCAC
AATNAT----

PB0142.1_Jundm2_2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AATGATCCAC---
ATTGATGAGTCACCAA