Information for 13-AGTAAAGGAA (Motif 16)


Reverse Opposite:

p-value:1e-6
log p-value:-1.496e+01
Information Content per bp:1.662
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets39.8 +/- 20.0bp
Average Position of motif in Background40.3 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

br(var.4)/MA0013.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AGTAAAGGAA
TAGTAAACAAA

AZF1/MA0277.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGTAAAGGAA-
--AAAAAGAAA

UME1/UME1_YPD/[](Harbison)/Yeast

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGTAAAGGAA
AAGGAAANGTA

RME1(MacIsaac)/Yeast

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGTAAAGGAA
TCCAAAGGAA

RME1/MA0370.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGTAAAGGAA
TCCAAAGGAA

Eip74EF/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGTAAAGGAA--
--AACAGGAAGT

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGTAAAGGAA
AAATAAAGCAA

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGTAAAGGAA
---AGAGGAA

Eip74EF/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.65
Offset:4
Orientation:forward strand
Alignment:AGTAAAGGAA--
----CAGGAAGT

PHYPADRAFT_140773/MA0987.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGTAAAGGAA
CAAAAAGTAA