Information for 17-CTGGAATCAA (Motif 19)


Reverse Opposite:

p-value:1e-5
log p-value:-1.322e+01
Information Content per bp:1.753
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets28.2 +/- 17.7bp
Average Position of motif in Background27.2 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTGGAATCAA
GGTCTGGCAT---

ara/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTGGAATCAA
----AATCAA

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTGGAATCAA
NCTGGAATGC-

pal-1/MA0924.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTGGAATCAA
--GTAATAAA

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGGAATCAA
CCWGGAATGY-

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTGGAATCAA-------
NNCCTGNAAAAAAAAAAAAA

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTGGAATCAA-------
NNCCTGNAAAAAAAAAAAAA

slbo/dmmpmm(Down)/fly

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGGAATCAA
--GCAATCAA

zen/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTGGAATCAA
----AATAAA

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGGAATCAA
CCWGGAATGY-