Information for 2-AAATGATGAC (Motif 2)


Reverse Opposite:

p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.728
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets39.3 +/- 19.5bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

skn-1/MA0547.1/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-AAATGATGAC----
AAAATGATGACAATT

ap/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AAATGATGAC
-AATNAT---

ATHB-15/MA1026.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AAATGATGAC
-AATNATTA-

eve/dmmpmm(Down)/fly

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AAATGATGAC
AAATNAT---

ATHB-6/MA0953.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAATGATGAC
GCAATAATT--

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AAATGATGAC--
TAAAAATGCTGACTT

ap/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AAATGATGAC
-AATNATA--

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AAATGATGAC---
AAAWWTGCTGACWWD

PB0176.1_Sox5_2/Jaspar

Match Rank:9
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AAATGATGAC-
NNCTNAATTATGANN

ATHB-16/MA0951.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AAATGATGAC
-AATTATTA-