Information for 18-ATWCTGTRTT (Motif 20)


Reverse Opposite:

p-value:1e-5
log p-value:-1.207e+01
Information Content per bp:1.832
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets37.7 +/- 19.0bp
Average Position of motif in Background63.3 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATWCTGTRTT-----
NNNTCCTTTGTTCTNNN

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATWCTGTRTT-
-NNCTTTATTD

ara/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATWCTGTRTT--
--NNTGTTATTN

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATWCTGTRTT
--GCTGTG--

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATWCTGTRTT-----
TNNTCCTTTGTTCTNNT

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----ATWCTGTRTT-
CNNNGCTACTGTANNN

SPT2/SPT2_YPD/[](Harbison)/Yeast

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ATWCTGTRTT---
--CCTGTCTCTAA

Mirr/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATWCTGTRTT--
--NNTGTTTTTT

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATWCTGTRTT--
NNGTANTGTTTTNC

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATWCTGTRTT-
NNTCCTGCTGTGNNN