Information for 3-ATGCTTGGGG (Motif 3)


Reverse Opposite:

p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.501
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets28.1 +/- 14.6bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YAP5(MacIsaac)/Yeast

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATGCTTGGGG
ATGCTT----

YAP5/MA0417.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATGCTTGGGG
ATGCTT----

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATGCTTGGGG---
-TGTCAGGGGGCG

HAT1/MA1024.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTTGGGG
NAATGATTGN--

ATHB-7/MA0954.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTTGGGG
NAATGATTGN--

ADR1/MA0268.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ATGCTTGGGG-
----GTGGGGT

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGCTTGGGG-----
ATTTTNGGGGGGCNN

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATGCTTGGGG
AAGCTTG---

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTTGGGG---
NNCTTTGTTTTGNTNNN

HAP4/HAP4_YPD/1-GZF3,11-HAP4(Harbison)/Yeast

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATGCTTGGGG
-TGATTGGCC