Information for 3-GGGTGTGGTGGC (Motif 6)


Reverse Opposite:

p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.837
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets35.3 +/- 17.7bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf1/MA0493.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGTGGTGGC
TGGGTGTGGCN--

Klf4/MA0039.2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGTGTGGTGGC
TGGGTGGGGC---

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGTGTGGTGGC
NTGGGTGTGGCC--

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGTGGTGGC
TGGGTGTGGC---

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GGGTGTGGTGGC
NNAGGGGCGGGGTNNA

SP3/MA0746.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGGTGTGGTGGC
GGGGGCGTGGN---

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGTGTGGTGGC
DGGGYGKGGC---

MET31(MacIsaac)/Yeast

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGGTGTGGTGGC
-GGTGTGGC---

RPN4/MA0373.1/Jaspar

Match Rank:9
Score:0.67
Offset:6
Orientation:forward strand
Alignment:GGGTGTGGTGGC-
------GGTGGCG

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GGGTGTGGTGGC
NANAAGGGCGTGGTC--