Information for 6-GCATGTGTCT (Motif 9)


Reverse Opposite:

p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.663
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets39.4 +/- 18.8bp
Average Position of motif in Background34.4 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

INO2/INO2_YPD/1-INO4,2-INO2(Harbison)/Yeast

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GCATGTGTCT
GCATGTG---

twi/dmmpmm(Down)/fly

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCATGTGTCT
ACATATGTT-

Hes2/MA0616.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCATGTGTCT---
GCACGTGTCNNNN

twi/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCATGTGTCT
-CATGTGTT-

twi/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCATGTGTCT
ACATGTG---

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCATGTGTCT
CCATGTGCTT

USF2/MA0526.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCATGTGTCT
GTCATGTGACC

twi/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCATGTGTCT
TCGCATATGTTG

twi/MA0249.1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCATGTGTCT
TCGCATATGTTG

PL0009.1_hlh-26/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCATGTGTCT---
TATGGCACGTGTCCAAT