Information for 1-ATCCCAGC (Motif 1)


Reverse Opposite:

p-value:1e-23
log p-value:-5.453e+01
Information Content per bp:1.549
Number of Target Sequences with motif267.0
Percentage of Target Sequences with motif29.70%
Number of Background Sequences with motif88.2
Percentage of Background Sequences with motif10.44%
Average Position of motif in Targets36.6 +/- 20.3bp
Average Position of motif in Background33.2 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ACE2/MA0267.1/Jaspar

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:ATCCCAGC-
--ACCAGCA

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ATCCCAGC--
TGCCCAGNHW

SWI5/MA0402.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ATCCCAGC-
-AACCAGCA

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------ATCCCAGC---
NNNTCCATCCCATAANN

SWI5/Literature(Harbison)/Yeast

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:ATCCCAGC-
---CCAGCA

PCF/Arabidopsis-Promoters/Homer

Match Rank:6
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ATCCCAGC---
NHHARGCCCAWWWNN

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATCCCAGC-
ATGCCAACC

MIG2/MA0338.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATCCCAGC-
--CCCCGCA

SWI5(MacIsaac)/Yeast

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATCCCAGC-
-AACCAGCA

MIG3/MA0339.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATCCCAGC-
--CCCCGCA