Information for 9-AGBRAGACYM (Motif 11)


Reverse Opposite:

p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.638
Number of Target Sequences with motif125.0
Percentage of Target Sequences with motif13.90%
Number of Background Sequences with motif44.4
Percentage of Background Sequences with motif5.26%
Average Position of motif in Targets37.6 +/- 20.8bp
Average Position of motif in Background41.5 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

dl/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGBRAGACYM
-GGAAAATCC

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGBRAGACYM
GAAAGTGAAAGT-

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGBRAGACYM
ACTGAAACCA

dl/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGBRAGACYM
GGGGAAAATCC

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGBRAGACYM----
CTGATCGAAACCAAAGT

dl(var.2)/MA0023.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGBRAGACYM-
-GGAAAACCCC

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGBRAGACYM----
GGAAAGCGAAACCAAAAC

PRDM1/MA0508.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGBRAGACYM-
AGAAAGTGAAAGTGA

Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGBRAGACYM--
GGGAAAAMCCCG

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGBRAGACYM
GAAASYGAAASY-