Information for 10-AAATGAGGCA (Motif 12)


Reverse Opposite:

p-value:1e-9
log p-value:-2.151e+01
Information Content per bp:1.711
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.45%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets34.5 +/- 18.1bp
Average Position of motif in Background27.0 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BATF::JUN/MA0462.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AAATGAGGCA
GAAATGACTCA

FOS/MA0476.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AAATGAGGCA--
-NATGAGTCANN

JDP2/MA0655.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AAATGAGGCA-
--ATGAGTCAT

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAATGAGGCA---
-NATGASTCABNN

JUN(var.2)/MA0489.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAATGAGGCA-
AGGAGATGACTCAT

JUND/MA0491.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAATGAGGCA--
-NATGAGTCACN

NFE2/MA0841.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAATGAGGCA--
-GATGAGTCATN

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAATGAGGCA-
-DATGASTCAT

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAATGAGGCA--
NNATGASTCATH

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAATGAGGCA---
-DATGASTCATHN