Information for 8-GCACTTTGGGAG (Motif 16)


Reverse Opposite:

p-value:1e-6
log p-value:-1.386e+01
Information Content per bp:1.788
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif6.90%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif2.17%
Average Position of motif in Targets35.7 +/- 19.5bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCACTTTGGGAG--
RGSMTBCTGGGAAAT

Dof3/MA0021.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCACTTTGGGAG
-CGCTTT-----

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCACTTTGGGAG
-----TGGGGA-

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCACTTTGGGAG
NNATTGGACTTTNGNN-

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCACTTTGGGAG
CAATGCATTGTGGGTA

PBF/MA0064.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCACTTTGGGAG
--GCTTT-----

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCACTTTGGGAG
CTGACCTTTG----

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACTTTGGGAG--
TGGACTTTGNNCTCN

byn/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCACTTTGGGAG
TCGCACTT------

schlank/MA0193.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GCACTTTGGGAG
-----TTGGTAG