Information for 4-CTGGKTTCAA (Motif 7)


Reverse Opposite:

p-value:1e-13
log p-value:-3.202e+01
Information Content per bp:1.703
Number of Target Sequences with motif117.0
Percentage of Target Sequences with motif13.01%
Number of Background Sequences with motif27.8
Percentage of Background Sequences with motif3.29%
Average Position of motif in Targets37.0 +/- 18.2bp
Average Position of motif in Background42.5 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CTGGKTTCAA-
-TGGTTTCAGT

che-1/MA0260.1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTGGKTTCAA
--GGTTTC--

MA0260.1_che-1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTGGKTTCAA
--GGTTTC--

Six4/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTGGKTTCAA--
--GGTATCAAAT

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CTGGKTTCAA----
CTCCAGGGGTCAATTGA

STE12/MA0393.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTGGKTTCAA
--TGTTTCA-

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTGGKTTCAA-
-CGGTTTCAAA

DIG1/DIG1_YPD/32-STE12(Harbison)/Yeast

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTGGKTTCAA
--TGTTTCA-

STE12/STE12_Alpha/92-STE12(Harbison)/Yeast

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTGGKTTCAA
--TGTTTCA-

STE12(MacIsaac)/Yeast

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTGGKTTCAA
--TGTTTCA-