Information for 7-AARWGATGRK (Motif 8)


Reverse Opposite:

p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.626
Number of Target Sequences with motif219.0
Percentage of Target Sequences with motif24.36%
Number of Background Sequences with motif93.8
Percentage of Background Sequences with motif11.10%
Average Position of motif in Targets35.6 +/- 17.9bp
Average Position of motif in Background36.7 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

pros/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AARWGATGRK
-AGNCATG--

Unknown2/Drosophila-Promoters/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AARWGATGRK
TAGKGATG--

POL002.1_INR/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AARWGATGRK
-NNNANTGA-

skn-1/MA0547.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AARWGATGRK----
AAAATGATGACAATT

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AARWGATGRK
-AGGAATG--

PB0176.1_Sox5_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AARWGATGRK-
NNCTNAATTATGANN

LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AARWGATGRK
ATGATTRATG--

HAHB4(HD-ZIP)/Helianthus anuus/AthaMap

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AARWGATGRK
TAATGATTG-

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AARWGATGRK---
NNNNNATTGATGNGTGN

TOD6?/SacCer-Promoters/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AARWGATGRK--
--GCGATGAGMT